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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899383.1_cds_XP_016449330.1_43890
CDS Infomation

[gene=LOC107774349] [db_xref=GeneID:107774349] [protein=zingipain-2-like] [protein_id=XP_016449330.1] [location=complement(join(15210..15781,16049..16496))] [gbkey=CDS]
Sequence

ATGGCTATGAAAATCAATTTGATCAGTGTTGTAATATTGTTCTTTGTAGTTGGCATGTAC
AAGTCTCATGCAACGGCTCGCAACCTGCAGCCAGAATTGTCTGTGTCTGAGAGACACGAG
CTGTGGATGGCACGTCATGGACGAGTTTACAAGGATGAAGCAGAAAAAGGAAAACGACTC
ATGATATTTAAAGAAAACATGCAATTCATTGAGTCAATCAATAGGGCAGGAAATCTGTCT
TATAAGTTGGGCATCAATGAATATGCTGATATTACTTCAGACGAGTTTTTTGCTAGGTAC
ACTGGATTAAACATGCCTTCACACCTTCCATCTTCTCCGGTATCGTCGATGGAATTCAAG
ATTAATGATCTAACTGATGACATACCGTCGAACTTGGATTGGAGAGAGAAAGGAGCTGTC
ACTGAAGTGAAGCATCAAGGTCAATGTGGATGTTGCTGGGCATTCTCTGCGGTTGGAGCA
CTAGAGGGAGCATACCAAATTGCAACAGGCCAAAAGGTGGAACTTTCTGAGCAAGAACTT
CTCGATTGCACCACCAATAACAATGGCTGCAAAGGAGGATTTATGACCAATGCATTTAAA
TTCATCATAGAAAATGGTGGAATTTCCACTGAATCAGACTACCCTTATGAAATGAAACAA
GACACATGCAGAAGCCAAGAGCTCACACCAGCAGTTAAAATAAGTAGCTATCAAGTTGTG
CCTGAAAGTGAAACAGCATTATTGCAAGCCGTAACTCAACAACCAGTGTCAATTGGAATT
TCTGCTAGCCGAGAGTTCCAATTCTACCAAGGAGGAACTTATCATGGAAGTTGCGCAGAT
CAAATTAACCATGCTGTTACAGCCATAGGATATGGAACTGATGATGAACAAGGTCAAAAT
TATTGGTTATTGAAGAATTCATGGGGAACATCTTGGGGTGAGAATGGATTTATGAGAATT
ATAAGAGGTACTGGAGGTCATTGTGACATCACCAAGTTGTCTTCTTATCCAATCATTTAA

Peptide Sequence

PEP ID

XP_016449330.1
PEP Infomation

PREDICTED: zingipain-2-like [Nicotiana tabacum]
Sequence

MAMKINLISVVILFFVVGMYKSHATARNLQPELSVSERHELWMARHGRVYKDEAEKGKRL
MIFKENMQFIESINRAGNLSYKLGINEYADITSDEFFARYTGLNMPSHLPSSPVSSMEFK
INDLTDDIPSNLDWREKGAVTEVKHQGQCGCCWAFSAVGALEGAYQIATGQKVELSEQEL
LDCTTNNNGCKGGFMTNAFKFIIENGGISTESDYPYEMKQDTCRSQELTPAVKISSYQVV
PESETALLQAVTQQPVSIGISASREFQFYQGGTYHGSCADQINHAVTAIGYGTDDEQGQN
YWLLKNSWGTSWGENGFMRIIRGTGGHCDITKLSSYPII

Transcript Sequence

Gene sequence data has not been registered.